Alan J. Wolfe Ph.D.,  Microbiology & Immunology, Loyola University Chicago

 
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 Mapping the global impact of a high-energy metabolic intermediate on a signal transduction network

Derived from acetyl-CoA, the keystone compound of central metabolism, acetyl-P stores more energy than does ATP. This ability forms the basis for its proposed role as a global signal. Although the seminal studies that formed the basis for this proposal were performed more than a decade ago, two major questions have remained unanswered: Does acetyl-P actually exert a global impact upon cellular physiology? And, if so, how does it do it?

We can now confidently answer ‘yes’ to the first question. A few years ago, we reported the existence of about 100 acetyl-P-sensitive genes, mostly involved in the transition of motile individuals into sessile biofilm communities. Now, we can report that much (but not all) of this response acts through the two-component signal transduction (2CST) response regulator RcsB. This global regulator controls about 2.5% of the entire genome, including genes that encode the enzymes that synthesize cell surface organelles (capsule, flagella, and type 1 pili) required for the proper development of biofilms. Thus, we have established a role for acetyl-P as a significant input into the network of 2CST pathways and demonstrated definitively the existence of a direct link from central metabolism to signal transduction.

We also can confidently answer ‘yes’ to the second question. Over the past two years, we have taken a classic thin layer chromatographic assay for the measurement of phosphorylated compounds and optimized it for the accurate and reproducible detection of the highly unstable acetyl-P. We can now say that the intracellular concentration of acetyl-P rivals that of ATP. This observation negates the major argument against the hypothesis that acetyl-P donates phosphoryl groups directly to certain response regulators, i.e. that the intracellular pool of acetyl-P is too small.

Now that we have demonstrated that acetyl-P actually functions as a global signal and that it can do so by donating its phosphoryl group to certain RR, we have initiated a three-pronged research plan. We have begun a genetics-based systems biological approach to determine the full impact of acetyl-P on the entire network of 2CST pathways. We have begun to dissect the regulatory mechanisms used by cells to regulate the levels of this highly reactive global signal. Finally, we have initiated collaborations with physical chemists (Drs. Paul Chiarelli and David French of Loyola University Chicago) to develop mass and NMR-based assays to monitor acetyl-P.